BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F11SP1|AL429443
(404 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1325 707 0.0
>3x_Contig1325
Length = 7053
Score = 707 bits (346), Expect = 0.0
Identities = 376/398 (94%)
Strand = Plus / Minus
Query: 1 ccaagamaatcatacacgatattcgtcagccatcttcaacactattcaatttacagacgt 60
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5052 ccaagaaaatcatacacgatattcgtcagcaatcttcaacactattcaatttacagacgt 4993
Query: 61 tatggttagatgattctmgtgntgntaatgamaaymggcaatattggvatytccaaggta 120
||||||||||||||||| ||| || |||||| || ||||||||||| || |||||||||
Sbjct: 4992 tatggttagatgattctagtgatgataatgaaaataggcaatattggaatttccaaggta 4933
Query: 121 tctcccataactttttmmtcaagttcatgtaccattttyccaatccamagtttgaggmtt 180
|||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 4932 tctcccataactttttaatcaagttcatgtaccatttttccaatccaaagtttgaggatt 4873
Query: 181 caggtcagccaaagcmgagtatcgagctttatttcacmytccttgatagatatttagaaa 240
||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4872 caggtcagcaaaagcagagtatcgagctttatttcaaattccttgatagatatttagaaa 4813
Query: 241 maaagttgtttcgctgtatcgacatattctgcgatgaaaagtcaggtctcacaaaggaat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4812 caaagttgtttcgctgtatcgacatattctgcgatgaaaagtcaggtctcacaaaggaat 4753
Query: 301 tmgttcatgagcaattcatcaaccatacattgaatccaataagaaataaaatcacccaaa 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4752 tcgttcatgagcaattcatcaaccatacattgaatccaataagaaataaaatcacccaaa 4693
Query: 361 ctttgttaaatatatcggaaaatcaaacgaatgaaaac 398
||||||||||||||||||||||||||||||||||||||
Sbjct: 4692 ctttgttaaatatatcggaaaatcaaacgaatgaaaac 4655
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2193
Number of Sequences: 1807
Number of extensions: 2193
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 404
length of database: 10,358,551
effective HSP length: 15
effective length of query: 389
effective length of database: 10,331,446
effective search space: 4018932494
effective search space used: 4018932494
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 48 (98.5 bits)